Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_17570 | Not Available | Negative | 3949147 - 3949440 | 10701.5 |
| penicillin-binding protein 1c | PviCFBP13507_17575 | Not Available | Positive | 3949536 - 3951932 | 88074.5 |
| response regulator | PviCFBP13507_17580 | Not Available | Negative | 3952426 - 3952833 | 15441.7 |
| flp family type ivb pilin | PviCFBP13507_17585 | Not Available | Negative | 3952923 - 3953111 | 6781.4 |
| flp pilus assembly protein cpab | PviCFBP13507_17590 | Not Available | Positive | 3953476 - 3954435 | 33826.7 |
| secretin | PviCFBP13507_17595 | Not Available | Positive | 3954456 - 3955706 | 43799.6 |
| pilus assembly protein | PviCFBP13507_17600 | Not Available | Positive | 3955703 - 3956893 | 42912.7 |
| atpase | PviCFBP13507_17605 | Not Available | Positive | 3956893 - 3958149 | 46606.5 |
| type ii secretion system protein f | PviCFBP13507_17610 | Not Available | Positive | 3958168 - 3959052 | 33211.3 |
| type ii secretion system protein f | PviCFBP13507_17615 | Not Available | Positive | 3959055 - 3959939 | 32488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
