Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | PviCFBP13507_17470 | Not Available | Positive | 3921410 - 3922765 | 48080.8 |
| acyl dehydratase | PviCFBP13507_17475 | Not Available | Positive | 3922793 - 3923653 | 31871.6 |
| nucleotide pyrophosphohydrolase | PviCFBP13507_17480 | Not Available | Positive | 3923788 - 3924093 | 11772.0 |
| methyltransferase domain-containing protein | PviCFBP13507_17485 | Not Available | Positive | 3924090 - 3924839 | 28359.3 |
| duf4136 domain-containing protein | PviCFBP13507_17490 | Not Available | Positive | 3924859 - 3925482 | 22864.8 |
| duf4136 domain-containing protein | PviCFBP13507_17495 | Not Available | Positive | 3925502 - 3926065 | 21260.1 |
| hypothetical protein | PviCFBP13507_17500 | Not Available | Positive | 3926700 - 3928730 | 68897.2 |
| pas domain-containing sensor histidine kinase | PviCFBP13507_17505 | Not Available | Negative | 3928727 - 3931426 | 100749.0 |
| pilus assembly protein tade | PviCFBP13507_17510 | Not Available | Negative | 3931485 - 3931940 | 16333.0 |
| prepilin peptidase | PviCFBP13507_17515 | Not Available | Positive | 3932016 - 3932486 | 17053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
