Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone | PviCFBP13507_17420 | Not Available | Negative | 3911401 - 3911598 | 7096.55 |
| hypothetical protein | PviCFBP13507_17425 | Not Available | Positive | 3911744 - 3912124 | 13668.7 |
| copper-transporting atpase | PviCFBP13507_17430 | Not Available | Positive | 3912194 - 3914392 | 77512.1 |
| cu(i)-responsive transcriptional regulator | PviCFBP13507_17435 | Not Available | Positive | 3914389 - 3914790 | 14801.7 |
| serine protein kinase rio | PviCFBP13507_17440 | Not Available | Negative | 3915123 - 3916019 | 33040.3 |
| arac family transcriptional regulator | PviCFBP13507_17445 | Not Available | Negative | 3916229 - 3917032 | 29738.6 |
| bile acid:sodium symporter | PviCFBP13507_17450 | Not Available | Positive | 3917118 - 3918146 | 37000.5 |
| duf726 domain-containing protein | PviCFBP13507_17455 | Not Available | Negative | 3918154 - 3919605 | 53963.1 |
| hypothetical protein | PviCFBP13507_17460 | Not Available | Negative | 3919640 - 3919918 | 10046.2 |
| acetyl-coa c-acetyltransferase | PviCFBP13507_17465 | Not Available | Negative | 3920023 - 3921300 | 45582.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
