Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-dicitrate transporter permease fecc | PviCFBP13507_17370 | Not Available | Positive | 3900193 - 3901167 | 33033.5 |
| iron-dicitrate transporter subunit fecd | PviCFBP13507_17375 | Not Available | Positive | 3901164 - 3902132 | 33543.4 |
| iron-dicitrate abc transporter atp-binding subunit | PviCFBP13507_17380 | Not Available | Positive | 3902137 - 3902928 | 28464.6 |
| bmp family abc transporter substrate-binding protein | PviCFBP13507_17385 | Not Available | Positive | 3903079 - 3904173 | 39400.2 |
| 2og-fe(ii) oxygenase | PviCFBP13507_17390 | Not Available | Positive | 3904248 - 3905216 | 36434.1 |
| adenosine deaminase | PviCFBP13507_17395 | Not Available | Positive | 3905299 - 3906252 | 36019.8 |
| transcriptional regulator | PviCFBP13507_17400 | Not Available | Negative | 3906618 - 3907310 | 24571.8 |
| lysr family transcriptional regulator | PviCFBP13507_17405 | Not Available | Negative | 3907766 - 3908671 | 33452.4 |
| zinc-binding alcohol dehydrogenase family protein | PviCFBP13507_17410 | Not Available | Positive | 3908786 - 3909799 | 36623.0 |
| mfs transporter | PviCFBP13507_17415 | Not Available | Negative | 3909856 - 3911052 | 41774.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
