Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein | PviCFBP13507_17265 | Not Available | Negative | 3875617 - 3876087 | 17558.6 |
| gnat family n-acetyltransferase | PviCFBP13507_17270 | Not Available | Positive | 3876278 - 3876736 | 16699.9 |
| duf2986 domain-containing protein | PviCFBP13507_17275 | Not Available | Negative | 3876789 - 3876950 | 5758.98 |
| csbd family protein | PviCFBP13507_17280 | Not Available | Positive | 3877204 - 3877452 | 8520.31 |
| atp-dependent helicase hrpb | PviCFBP13507_17285 | Not Available | Negative | 3877575 - 3880109 | 93140.3 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | PviCFBP13507_17290 | Not Available | Negative | 3880920 - 3882413 | 53637.4 |
| aspartate aminotransferase family protein | PviCFBP13507_17295 | Not Available | Negative | 3882495 - 3883841 | 48674.4 |
| lysr family transcriptional regulator | PviCFBP13507_17300 | Not Available | Positive | 3883954 - 3884874 | 33675.6 |
| purine permease | PviCFBP13507_17305 | Not Available | Positive | 3885072 - 3886469 | 48749.8 |
| tetr family transcriptional regulator | PviCFBP13507_17310 | Not Available | Positive | 3886554 - 3887216 | 24841.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
