Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase family protein | PviCFBP13507_01550 | Not Available | Negative | 346812 - 347879 | 40700.6 |
| scp-2 family sterol carrier protein | PviCFBP13507_01555 | Not Available | Negative | 348088 - 348405 | 11230.5 |
| histidine phosphatase family protein | PviCFBP13507_01560 | Not Available | Negative | 348474 - 349184 | 25782.0 |
| protease sohb | PviCFBP13507_01565 | Not Available | Positive | 349388 - 350413 | 38068.3 |
| duf934 domain-containing protein | PviCFBP13507_01570 | Not Available | Negative | 351068 - 351562 | 18897.2 |
| nitrite/sulfite reductase | PviCFBP13507_01575 | Not Available | Negative | 351546 - 353204 | 62385.2 |
| sugar abc transporter substrate-binding protein | PviCFBP13507_01580 | Not Available | Positive | 353741 - 354841 | 40901.1 |
| duf2970 domain-containing protein | PviCFBP13507_01585 | Not Available | Negative | 354823 - 355053 | 8442.37 |
| methionine synthase | PviCFBP13507_01590 | Not Available | Negative | 355539 - 359258 | 136325.0 |
| peptidylprolyl isomerase | PviCFBP13507_01595 | Not Available | Positive | 359415 - 361718 | 86070.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
