Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | PviCFBP13507_17110 | Not Available | Positive | 3838109 - 3839731 | 60336.9 |
| abc transporter substrate-binding protein | PviCFBP13507_17115 | Not Available | Positive | 3840044 - 3841642 | 59715.0 |
| outer membrane porin, oprd family | PviCFBP13507_17120 | Not Available | Positive | 3841798 - 3843213 | 52074.1 |
| abc transporter substrate-binding protein | PviCFBP13507_17125 | Not Available | Positive | 3843280 - 3844875 | 59051.3 |
| peptide abc transporter permease | PviCFBP13507_17130 | Not Available | Positive | 3844947 - 3845957 | 36918.3 |
| dipeptide abc transporter permease dppc | PviCFBP13507_17135 | Not Available | Positive | 3845968 - 3846879 | 32579.8 |
| abc transporter atp-binding protein | PviCFBP13507_17140 | Not Available | Positive | 3846890 - 3847858 | 34714.5 |
| abc transporter atp-binding protein | PviCFBP13507_17145 | Not Available | Positive | 3847858 - 3848832 | 35784.4 |
| flavodoxin | PviCFBP13507_17150 | Not Available | Negative | 3848896 - 3851436 | 93303.0 |
| tonb-dependent siderophore receptor | PviCFBP13507_17155 | Not Available | Negative | 3851582 - 3853834 | 81339.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
