Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactarate dehydratase | PviCFBP13507_17055 | Not Available | Negative | 3824190 - 3825743 | 56015.8 |
| mfs transporter | PviCFBP13507_17060 | Not Available | Negative | 3825754 - 3827136 | 49908.5 |
| 5-dehydro-4-deoxyglucarate dehydratase | PviCFBP13507_17065 | Not Available | Negative | 3827302 - 3828213 | 32680.3 |
| fadr family transcriptional regulator | PviCFBP13507_17070 | Not Available | Negative | 3828852 - 3829601 | 27801.8 |
| abc transporter atp-binding protein/permease | PviCFBP13507_17075 | Not Available | Negative | 3829702 - 3831435 | 65599.0 |
| dna-binding response regulator | PviCFBP13507_17085 | Not Available | Negative | 3831525 - 3832088 | 20774.0 |
| sensor histidine kinase | PviCFBP13507_17090 | Not Available | Negative | 3832085 - 3833344 | 46581.7 |
| duf541 domain-containing protein | PviCFBP13507_17095 | Not Available | Positive | 3833537 - 3834253 | 25689.7 |
| hypothetical protein | PviCFBP13507_17100 | Not Available | Positive | 3834589 - 3836136 | 57541.7 |
| abc transporter substrate-binding protein | PviCFBP13507_17105 | Not Available | Positive | 3836243 - 3837844 | 59659.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
