Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_17005 | Not Available | Negative | 3813990 - 3814316 | 10617.5 |
| sensor domain-containing phosphodiesterase | PviCFBP13507_17010 | Not Available | Positive | 3814619 - 3816442 | 68311.0 |
| sulfite exporter taue/safe family protein | PviCFBP13507_17015 | Not Available | Positive | 3816533 - 3817318 | 27218.4 |
| hypothetical protein | PviCFBP13507_17020 | Not Available | Positive | 3817531 - 3817746 | 8222.83 |
| termination factor rho | PviCFBP13507_17025 | Not Available | Positive | 3818465 - 3818866 | 14287.7 |
| duf3182 domain-containing protein | PviCFBP13507_17030 | Not Available | Positive | 3818906 - 3820003 | 39365.7 |
| alpha/beta hydrolase | PviCFBP13507_17035 | Not Available | Positive | 3820000 - 3820770 | 28497.0 |
| hypothetical protein | PviCFBP13507_17040 | Not Available | Negative | 3820797 - 3821036 | 8865.1 |
| hypothetical protein | PviCFBP13507_17045 | Not Available | Positive | 3821259 - 3821885 | 23072.8 |
| gluconolaconase | PviCFBP13507_17050 | Not Available | Negative | 3822161 - 3823405 | 45235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
