Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allophanate hydrolase | PviCFBP13507_16855 | Not Available | Positive | 3777516 - 3779336 | 64107.4 |
| bmp family abc transporter substrate-binding protein | PviCFBP13507_16860 | Not Available | Positive | 3779352 - 3780461 | 39375.5 |
| abc transporter permease | PviCFBP13507_16865 | Not Available | Positive | 3780472 - 3781581 | 38640.7 |
| abc transporter permease | PviCFBP13507_16870 | Not Available | Positive | 3781574 - 3782494 | 31662.3 |
| formamidase | PviCFBP13507_16875 | Not Available | Positive | 3782519 - 3783544 | 37454.7 |
| cysteine hydrolase | PviCFBP13507_16880 | Not Available | Positive | 3783541 - 3784227 | 24714.9 |
| abc transporter atp-binding protein | PviCFBP13507_16885 | Not Available | Positive | 3784230 - 3785765 | 56055.4 |
| cysteine hydrolase | PviCFBP13507_16890 | Not Available | Positive | 3785762 - 3786439 | 24218.2 |
| oxalurate catabolism protein hpxz | PviCFBP13507_16895 | Not Available | Positive | 3786439 - 3786825 | 14391.8 |
| gntr family transcriptional regulator | PviCFBP13507_16900 | Not Available | Positive | 3786831 - 3787517 | 26920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
