Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_16800 | Not Available | Negative | 3766225 - 3766704 | 18267.8 |
| response regulator | PviCFBP13507_16805 | Not Available | Negative | 3766710 - 3767717 | 35892.8 |
| duf2384 domain-containing protein | PviCFBP13507_16810 | Not Available | Positive | 3768030 - 3768479 | 16931.3 |
| hypothetical protein | PviCFBP13507_16815 | Not Available | Positive | 3768476 - 3768949 | 17120.5 |
| transglycosylase | PviCFBP13507_16820 | Not Available | Negative | 3769451 - 3770614 | 41805.9 |
| dna starvation/stationary phase protection protein | PviCFBP13507_16825 | Not Available | Positive | 3770834 - 3771307 | 17839.4 |
| stress response protein terz | PviCFBP13507_16830 | Not Available | Negative | 3771436 - 3772683 | 44007.9 |
| chemotaxis protein | PviCFBP13507_16835 | Not Available | Negative | 3772883 - 3774196 | 47871.8 |
| gdp-mannose 4,6-dehydratase | PviCFBP13507_16840 | Not Available | Positive | 3774459 - 3775490 | 38616.2 |
| gdp-mannose 4,6 dehydratase | PviCFBP13507_16845 | Not Available | Positive | 3775490 - 3776386 | 32366.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
