Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | PviCFBP13507_16700 | Not Available | Positive | 3742881 - 3743879 | 36710.9 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | PviCFBP13507_16705 | Not Available | Positive | 3743869 - 3744222 | 12982.4 |
| hypothetical protein | PviCFBP13507_16710 | Not Available | Positive | 3744254 - 3746257 | 73029.3 |
| glycosyl transferase family 2 | PviCFBP13507_16715 | Not Available | Negative | 3746263 - 3750621 | 164180.0 |
| sugar abc transporter atp-binding protein | PviCFBP13507_16720 | Not Available | Negative | 3750608 - 3751978 | 50499.2 |
| abc transporter permease | PviCFBP13507_16725 | Not Available | Negative | 3751968 - 3752795 | 30263.9 |
| sdr family nad(p)-dependent oxidoreductase | PviCFBP13507_16730 | Not Available | Negative | 3753476 - 3754240 | 26858.0 |
| outer membrane porin, oprd family | PviCFBP13507_16735 | Not Available | Positive | 3754721 - 3755989 | 46593.5 |
| nad(p)-dependent oxidoreductase | PviCFBP13507_16740 | Not Available | Positive | 3756168 - 3756995 | 30430.8 |
| gluconolactonase | PviCFBP13507_16745 | Not Available | Positive | 3757041 - 3757925 | 31952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
