Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein cheb | PviCFBP13507_01500 | Not Available | Positive | 335949 - 336563 | 22066.4 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_01505 | Not Available | Positive | 336557 - 337738 | 44122.7 |
| response regulator | PviCFBP13507_01510 | Not Available | Positive | 337850 - 338227 | 13533.6 |
| pas domain s-box protein | PviCFBP13507_01515 | Not Available | Negative | 338525 - 340555 | 74754.3 |
| circadian clock protein kaic | PviCFBP13507_01520 | Not Available | Negative | 340552 - 342036 | 54714.8 |
| crotonase/enoyl-coa hydratase family protein | PviCFBP13507_01525 | Not Available | Positive | 342254 - 343066 | 29865.3 |
| nad(+) diphosphatase | PviCFBP13507_01530 | Not Available | Positive | 343106 - 343942 | 31211.4 |
| hypothetical protein | PviCFBP13507_01535 | Not Available | Negative | 343910 - 344689 | 27089.6 |
| gfo/idh/moca family oxidoreductase | PviCFBP13507_01540 | Not Available | Negative | 344763 - 345911 | 41219.9 |
| short-chain dehydrogenase | PviCFBP13507_01545 | Not Available | Negative | 346021 - 346788 | 26635.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
