Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | PviCFBP13507_16650 | Not Available | Negative | 3730569 - 3733667 | 116613.0 |
| hypothetical protein | PviCFBP13507_16655 | Not Available | Positive | 3733806 - 3734012 | 7551.07 |
| hypothetical protein | PviCFBP13507_16660 | Not Available | Positive | 3734313 - 3734603 | 10275.3 |
| hypothetical protein | PviCFBP13507_16665 | Not Available | Positive | 3734902 - 3735450 | 19384.0 |
| ycek/yidq family lipoprotein | PviCFBP13507_16670 | Not Available | Positive | 3735540 - 3735875 | 11842.3 |
| hypothetical protein | PviCFBP13507_16675 | Not Available | Positive | 3736044 - 3736289 | 9337.17 |
| replication terminus site-binding protein | PviCFBP13507_16680 | Not Available | Positive | 3736365 - 3737342 | 36594.3 |
| methyl-accepting chemotaxis protein | PviCFBP13507_16685 | Not Available | Negative | 3737778 - 3739658 | 66892.5 |
| methyl-accepting chemotaxis protein | PviCFBP13507_16690 | Not Available | Positive | 3740029 - 3741951 | 69341.8 |
| hypothetical protein | PviCFBP13507_16695 | Not Available | Negative | 3742030 - 3742650 | 23626.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
