Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron uptake transcriptional regulator | PviCFBP13507_16545 | Not Available | Negative | 3705868 - 3706275 | 15243.2 |
| outer membrane protein assembly factor bame | PviCFBP13507_16550 | Not Available | Positive | 3706374 - 3706898 | 19301.0 |
| rnfh family protein | PviCFBP13507_16555 | Not Available | Negative | 3706963 - 3707283 | 11376.7 |
| type ii toxin-antitoxin system rata family toxin | PviCFBP13507_16560 | Not Available | Negative | 3707276 - 3707710 | 16062.3 |
| sodium-dependent transporter | PviCFBP13507_16565 | Not Available | Negative | 3707718 - 3709121 | 50601.0 |
| ssra-binding protein smpb | PviCFBP13507_16570 | Not Available | Positive | 3709235 - 3709717 | 18407.4 |
| fcd domain-containing protein | PviCFBP13507_16575 | Not Available | Negative | 3710134 - 3710901 | 28948.6 |
| l-lactate permease | PviCFBP13507_16580 | Not Available | Positive | 3711300 - 3712991 | 59260.9 |
| (fe-s)-binding protein | PviCFBP13507_16585 | Not Available | Positive | 3713075 - 3713911 | 30885.6 |
| iron-sulfur cluster-binding protein | PviCFBP13507_16590 | Not Available | Positive | 3713908 - 3715371 | 54124.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
