Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | PviCFBP13507_16495 | Not Available | Negative | 3692527 - 3693177 | 24100.1 |
| ribosome assembly rna-binding protein yhby | PviCFBP13507_16500 | Not Available | Positive | 3693282 - 3693590 | 11426.2 |
| transcription elongation factor grea | PviCFBP13507_16505 | Not Available | Negative | 3693735 - 3694211 | 17392.9 |
| carbamoyl-phosphate synthase large subunit | PviCFBP13507_16510 | Not Available | Negative | 3694208 - 3697429 | 117540.0 |
| carbamoyl-phosphate synthase small subunit | PviCFBP13507_16515 | Not Available | Negative | 3697566 - 3698702 | 40702.3 |
| 4-hydroxy-tetrahydrodipicolinate reductase | PviCFBP13507_16520 | Not Available | Negative | 3698976 - 3699779 | 28167.0 |
| molecular chaperone dnaj | PviCFBP13507_16525 | Not Available | Negative | 3699800 - 3700939 | 40558.7 |
| molecular chaperone dnak | PviCFBP13507_16530 | Not Available | Negative | 3701266 - 3703182 | 68657.6 |
| nucleotide exchange factor grpe | PviCFBP13507_16535 | Not Available | Negative | 3703284 - 3703847 | 20709.4 |
| dna repair protein recn | PviCFBP13507_16540 | Not Available | Positive | 3704118 - 3705791 | 61594.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
