Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | PviCFBP13507_16445 | Not Available | Negative | 3682006 - 3684540 | 91082.0 |
| transcription termination/antitermination protein nusa | PviCFBP13507_16450 | Not Available | Negative | 3684568 - 3686049 | 54396.7 |
| ribosome maturation factor rimp | PviCFBP13507_16455 | Not Available | Negative | 3686109 - 3686585 | 17741.3 |
| Trna-met | Not Available | Not Available | Positive | 3686698 - 3686774 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3686871 - 3686956 | Not Available |
| preprotein translocase subunit secg | PviCFBP13507_16470 | Not Available | Negative | 3687002 - 3687382 | 12880.7 |
| triose-phosphate isomerase | PviCFBP13507_16475 | Not Available | Negative | 3687387 - 3688142 | 26118.4 |
| phosphoglucosamine mutase | PviCFBP13507_16480 | Not Available | Negative | 3688209 - 3689552 | 48134.2 |
| dihydropteroate synthase | PviCFBP13507_16485 | Not Available | Negative | 3689569 - 3690420 | 29983.4 |
| atp-dependent zinc metalloprotease ftsh | PviCFBP13507_16490 | Not Available | Negative | 3690429 - 3692333 | 69019.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
