Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | PviCFBP13507_16395 | Not Available | Positive | 3671114 - 3672292 | 40261.8 |
| sam-dependent methyltransferase | PviCFBP13507_16400 | Not Available | Positive | 3672588 - 3673604 | 37455.6 |
| hypothetical protein | PviCFBP13507_16405 | Not Available | Positive | 3673713 - 3676691 | 109504.0 |
| duf2845 domain-containing protein | PviCFBP13507_16410 | Not Available | Positive | 3676742 - 3677020 | 10220.0 |
| bon domain-containing protein | PviCFBP13507_16415 | Not Available | Negative | 3677159 - 3677512 | 12173.8 |
| polyribonucleotide nucleotidyltransferase | PviCFBP13507_16420 | Not Available | Negative | 3677799 - 3679904 | 74977.5 |
| hypothetical protein | PviCFBP13507_16425 | Not Available | Negative | 3679901 - 3680080 | 6632.11 |
| 30s ribosomal protein s15 | PviCFBP13507_16430 | Not Available | Negative | 3680080 - 3680349 | 10001.2 |
| trna pseudouridine(55) synthase trub | PviCFBP13507_16435 | Not Available | Negative | 3680509 - 3681426 | 33531.1 |
| 30s ribosome-binding factor rbfa | PviCFBP13507_16440 | Not Available | Negative | 3681430 - 3681846 | 15410.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
