Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13507_16345 | Not Available | Positive | 3659838 - 3661271 | 52401.7 |
| hypothetical protein | PviCFBP13507_16350 | Not Available | Positive | 3661298 - 3661648 | 12917.5 |
| polynucleotide adenylyltransferase pcnb | PviCFBP13507_16355 | Not Available | Positive | 3661974 - 3663377 | 53528.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PviCFBP13507_16360 | Not Available | Positive | 3663370 - 3663876 | 18555.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PviCFBP13507_16365 | Not Available | Positive | 3664109 - 3664909 | 28069.4 |
| pantoate--beta-alanine ligase | PviCFBP13507_16370 | Not Available | Positive | 3664906 - 3665757 | 30808.1 |
| aspartate 1-decarboxylase | PviCFBP13507_16375 | Not Available | Positive | 3665765 - 3666145 | 14088.8 |
| glucose-6-phosphate isomerase | PviCFBP13507_16380 | Not Available | Positive | 3666331 - 3667995 | 61490.2 |
| acetate--coa ligase | PviCFBP13507_16385 | Not Available | Positive | 3668128 - 3670065 | 71431.8 |
| histidine kinase | PviCFBP13507_16390 | Not Available | Positive | 3670118 - 3670984 | 31906.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
