Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat-containing protein | PviCFBP13507_16295 | Not Available | Positive | 3650033 - 3650377 | 12805.1 |
| deoxyribose-phosphate aldolase | PviCFBP13507_16300 | Not Available | Negative | 3650713 - 3651486 | 27561.2 |
| iron(iii) abc transporter | PviCFBP13507_16305 | Not Available | Negative | 3651599 - 3652360 | 27630.0 |
| rieske (2fe-2s) protein | PviCFBP13507_16310 | Not Available | Positive | 3652525 - 3652863 | 12591.8 |
| dna/rna nuclease sfsa | PviCFBP13507_16315 | Not Available | Negative | 3652883 - 3653596 | 26380.7 |
| pyridoxal phosphate-dependent aminotransferase | PviCFBP13507_16320 | Not Available | Negative | 3653596 - 3654768 | 42771.9 |
| rna polymerase-binding protein dksa | PviCFBP13507_16325 | Not Available | Positive | 3655118 - 3655558 | 17040.3 |
| trna glutamyl-q(34) synthetase gluqrs | PviCFBP13507_16330 | Not Available | Positive | 3655715 - 3656602 | 33295.6 |
| hypothetical protein | PviCFBP13507_16335 | Not Available | Positive | 3656701 - 3656877 | 6951.71 |
| atpase | PviCFBP13507_16340 | Not Available | Positive | 3656861 - 3659815 | 108175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
