Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-methionine-sulfoxide reductase catalytic subunit msrp | PviCFBP13507_16245 | Not Available | Negative | 3638654 - 3639667 | 37932.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | PviCFBP13507_16250 | Not Available | Negative | 3639731 - 3640588 | 30534.2 |
| ketol-acid reductoisomerase | PviCFBP13507_16255 | Not Available | Negative | 3640737 - 3641753 | 36328.5 |
| acetolactate synthase small subunit | PviCFBP13507_16260 | Not Available | Negative | 3641800 - 3642291 | 17755.5 |
| acetolactate synthase 3 large subunit | PviCFBP13507_16265 | Not Available | Negative | 3642294 - 3644018 | 62514.9 |
| duf4124 domain-containing protein | PviCFBP13507_16270 | Not Available | Positive | 3644418 - 3644846 | 15762.4 |
| yqcc family protein | PviCFBP13507_16275 | Not Available | Negative | 3644858 - 3645187 | 12692.4 |
| hypothetical protein | PviCFBP13507_16280 | Not Available | Negative | 3645187 - 3645927 | 25192.3 |
| penicillin-binding protein 1b | PviCFBP13507_16285 | Not Available | Negative | 3645944 - 3648265 | 85010.9 |
| hypothetical protein | PviCFBP13507_16290 | Not Available | Positive | 3648398 - 3649936 | 56837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
