Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | PviCFBP13507_01450 | Not Available | Negative | 324146 - 325468 | 48189.1 |
| arac family transcriptional regulator | PviCFBP13507_01455 | Not Available | Negative | 325708 - 326613 | 34745.5 |
| precorrin-6a synthase (deacetylating) | PviCFBP13507_01460 | Not Available | Positive | 326743 - 327522 | 29377.0 |
| bro domain-containing protein | PviCFBP13507_01465 | Not Available | Negative | 327543 - 328094 | 21568.9 |
| duf4160 domain-containing protein | PviCFBP13507_01470 | Not Available | Positive | 328670 - 328921 | 9401.3 |
| duf2442 domain-containing protein | PviCFBP13507_01475 | Not Available | Positive | 328905 - 329477 | 20420.5 |
| glycosyltransferase | PviCFBP13507_01480 | Not Available | Negative | 329563 - 330768 | 45228.3 |
| response regulator | PviCFBP13507_01485 | Not Available | Negative | 330881 - 331246 | 13442.2 |
| two-component system sensor histidine kinase/response regulator | PviCFBP13507_01490 | Not Available | Positive | 331578 - 335084 | 131341.0 |
| protein-glutamate o-methyltransferase cher | PviCFBP13507_01495 | Not Available | Positive | 335131 - 335952 | 31550.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
