Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogen peroxide-inducible genes activator | PviCFBP13507_16040 | Not Available | Negative | 3601780 - 3602703 | 33656.8 |
| energy transducer tonb | PviCFBP13507_16045 | Not Available | Negative | 3602796 - 3603548 | 27291.3 |
| tonb system transport protein exbd | PviCFBP13507_16050 | Not Available | Negative | 3603545 - 3603970 | 15433.9 |
| tonb-system energizer exbb | PviCFBP13507_16055 | Not Available | Negative | 3603974 - 3604969 | 35369.0 |
| sdr family nad(p)-dependent oxidoreductase | PviCFBP13507_16060 | Not Available | Positive | 3605177 - 3606037 | 30972.5 |
| hypothetical protein | PviCFBP13507_16065 | Not Available | Negative | 3606096 - 3606833 | 26537.1 |
| rida family protein | PviCFBP13507_16070 | Not Available | Negative | 3606887 - 3607267 | 13400.3 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | PviCFBP13507_16075 | Not Available | Negative | 3607293 - 3609398 | 78515.2 |
| dna-directed rna polymerase subunit omega | PviCFBP13507_16080 | Not Available | Negative | 3609459 - 3609722 | 9678.46 |
| guanylate kinase | PviCFBP13507_16085 | Not Available | Negative | 3609870 - 3610490 | 23514.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
