Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_15685 | Not Available | Negative | 3529952 - 3530425 | 17024.3 |
| tryptophan synthase subunit alpha | PviCFBP13507_15690 | Not Available | Negative | 3530549 - 3531367 | 28679.3 |
| tryptophan synthase subunit beta | PviCFBP13507_15695 | Not Available | Negative | 3531364 - 3532593 | 44557.5 |
| lysr family transcriptional regulator | PviCFBP13507_15700 | Not Available | Positive | 3532673 - 3533629 | 34901.7 |
| duf883 domain-containing protein | PviCFBP13507_15705 | Not Available | Negative | 3533630 - 3533956 | 11695.8 |
| dodecin flavoprotein | PviCFBP13507_15710 | Not Available | Positive | 3534123 - 3534341 | 8159.58 |
| duf1161 domain-containing protein | PviCFBP13507_15715 | Not Available | Positive | 3534489 - 3534713 | 7607.36 |
| llm class flavin-dependent oxidoreductase | PviCFBP13507_15720 | Not Available | Negative | 3534845 - 3535846 | 36577.0 |
| osmc family peroxiredoxin | PviCFBP13507_15725 | Not Available | Positive | 3536061 - 3536492 | 14904.9 |
| duf1161 domain-containing protein | PviCFBP13507_15730 | Not Available | Positive | 3536643 - 3536876 | 8506.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
