Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_01400 | Not Available | Negative | 310848 - 311225 | 13268.1 |
| nad(p)-dependent alcohol dehydrogenase | PviCFBP13507_01405 | Not Available | Negative | 311995 - 313059 | 38243.8 |
| ggdef domain-containing protein | PviCFBP13507_01410 | Not Available | Positive | 313727 - 316213 | 92597.9 |
| hypothetical protein | PviCFBP13507_01415 | Not Available | Positive | 316387 - 316941 | 19083.3 |
| carbohydrate kinase | PviCFBP13507_01420 | Not Available | Negative | 317202 - 318140 | 34127.9 |
| xylulokinase | PviCFBP13507_01425 | Not Available | Negative | 318165 - 319646 | 52570.6 |
| mannitol dehydrogenase family protein | PviCFBP13507_01430 | Not Available | Negative | 319656 - 321137 | 54366.9 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | PviCFBP13507_01435 | Not Available | Negative | 321156 - 322262 | 39929.5 |
| carbohydrate abc transporter permease | PviCFBP13507_01440 | Not Available | Negative | 322294 - 323127 | 31002.7 |
| sugar abc transporter permease | PviCFBP13507_01445 | Not Available | Negative | 323138 - 324070 | 33876.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
