Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | PviCFBP13507_15535 | Not Available | Negative | 3497453 - 3497698 | 9176.15 |
| ribonuclease p protein component | PviCFBP13507_15540 | Not Available | Negative | 3497691 - 3498092 | 15124.4 |
| 50s ribosomal protein l34 | PviCFBP13507_15545 | Not Available | Negative | 3498109 - 3498243 | 5124.46 |
| chromosomal replication initiator protein dnaa | PviCFBP13507_15550 | Not Available | Positive | 3498828 - 3500360 | 57009.1 |
| dna polymerase iii subunit beta | PviCFBP13507_15555 | Not Available | Positive | 3500399 - 3501502 | 40572.0 |
| dna replication/repair protein recf | PviCFBP13507_15560 | Not Available | Positive | 3501523 - 3502626 | 41597.8 |
| dna topoisomerase (atp-hydrolyzing) subunit b | PviCFBP13507_15565 | Not Available | Positive | 3502631 - 3505048 | 90160.4 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | PviCFBP13507_15570 | Not Available | Negative | 3505151 - 3505540 | 14978.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PviCFBP13507_15575 | Not Available | Negative | 3506080 - 3506850 | 28620.0 |
| d-glycero-beta-d-manno-heptose-1,7-bisphosphate 7-phosphatase | PviCFBP13507_15580 | Not Available | Negative | 3506905 - 3507459 | 19517.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
