Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit b | PviCFBP13507_15485 | Not Available | Negative | 3487049 - 3487519 | 16983.4 |
| atp synthase subunit c | PviCFBP13507_15490 | Not Available | Negative | 3487577 - 3487834 | 8609.06 |
| atp synthase subunit a | PviCFBP13507_15495 | Not Available | Negative | 3487974 - 3488843 | 31774.5 |
| f0f1 atp synthase subunit i | PviCFBP13507_15500 | Not Available | Negative | 3488860 - 3489267 | 14854.8 |
| parb/repb/spo0j family partition protein | PviCFBP13507_15505 | Not Available | Negative | 3489414 - 3490286 | 32278.2 |
| para family protein | PviCFBP13507_15510 | Not Available | Negative | 3490296 - 3491087 | 28878.2 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | PviCFBP13507_15515 | Not Available | Negative | 3491106 - 3491753 | 23838.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | PviCFBP13507_15520 | Not Available | Negative | 3491759 - 3493651 | 69255.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | PviCFBP13507_15525 | Not Available | Negative | 3494315 - 3495685 | 48796.0 |
| membrane protein insertase yidc | PviCFBP13507_15530 | Not Available | Negative | 3495765 - 3497450 | 61809.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
