Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cina family protein | PviCFBP13507_15375 | Not Available | Positive | 3463968 - 3464453 | 17505.8 |
| iron-containing redox enzyme family protein | PviCFBP13507_15380 | Not Available | Positive | 3464599 - 3466050 | 54272.3 |
| sam-dependent methyltransferase | PviCFBP13507_15385 | Not Available | Positive | 3466047 - 3466991 | 34473.8 |
| tonb-dependent siderophore receptor | PviCFBP13507_15390 | Not Available | Positive | 3467367 - 3469319 | 71952.4 |
| abc transporter atp-binding protein | PviCFBP13507_15395 | Not Available | Positive | 3469319 - 3470098 | 28606.4 |
| iron abc transporter substrate-binding protein | PviCFBP13507_15400 | Not Available | Positive | 3470100 - 3471059 | 34713.4 |
| abc transporter permease | PviCFBP13507_15405 | Not Available | Positive | 3471056 - 3472096 | 36657.8 |
| eama-like transporter family protein | PviCFBP13507_15410 | Not Available | Positive | 3472385 - 3472831 | 15516.9 |
| lysr family transcriptional regulator | PviCFBP13507_15420 | Not Available | Negative | 3473031 - 3473954 | 34137.6 |
| glyoxalase | PviCFBP13507_15425 | Not Available | Positive | 3474009 - 3474422 | 15420.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
