Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter atp-binding protein | PviCFBP13507_15325 | Not Available | Negative | 3452234 - 3453535 | 47941.1 |
| sulfonate abc transporter permease | PviCFBP13507_15330 | Not Available | Negative | 3453561 - 3455315 | 63867.2 |
| hypothetical protein | PviCFBP13507_15335 | Not Available | Positive | 3455563 - 3456348 | 29698.5 |
| methyl-accepting chemotaxis protein | PviCFBP13507_15340 | Not Available | Negative | 3456400 - 3458313 | 68697.6 |
| methyl-accepting chemotaxis protein | PviCFBP13507_15345 | Not Available | Negative | 3458573 - 3460603 | 72666.9 |
| hypothetical protein | PviCFBP13507_15350 | Not Available | Negative | 3460933 - 3461196 | 9802.14 |
| hypothetical protein | PviCFBP13507_15355 | Not Available | Negative | 3461255 - 3461479 | 8671.25 |
| manganese catalase family protein | PviCFBP13507_15360 | Not Available | Positive | 3461909 - 3462790 | 31453.1 |
| hypothetical protein | PviCFBP13507_15365 | Not Available | Positive | 3462827 - 3463006 | 6510.93 |
| duf4142 domain-containing protein | PviCFBP13507_15370 | Not Available | Negative | 3463196 - 3463711 | 18492.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
