Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | PviCFBP13507_15275 | Not Available | Positive | 3439289 - 3440644 | 50951.5 |
| hypothetical protein | PviCFBP13507_15280 | Not Available | Positive | 3440740 - 3441195 | 17057.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PviCFBP13507_15285 | Not Available | Positive | 3441204 - 3441824 | 22959.8 |
| phosphatidate cytidylyltransferase | PviCFBP13507_15290 | Not Available | Positive | 3441824 - 3442753 | 34185.8 |
| glucan biosynthesis protein d | PviCFBP13507_15295 | Not Available | Positive | 3443164 - 3444783 | 60584.6 |
| hypothetical protein | PviCFBP13507_15300 | Not Available | Positive | 3445609 - 3446910 | 47274.0 |
| hypothetical protein | PviCFBP13507_15305 | Not Available | Positive | 3446921 - 3448249 | 50021.7 |
| acyltransferase | PviCFBP13507_15310 | Not Available | Positive | 3448397 - 3450280 | 69519.3 |
| dna-binding response regulator | PviCFBP13507_15315 | Not Available | Negative | 3450480 - 3451118 | 23308.3 |
| sensor histidine kinase | PviCFBP13507_15320 | Not Available | Negative | 3451118 - 3452182 | 37776.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
