Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | PviCFBP13507_15225 | Not Available | Positive | 3426512 - 3427951 | 53505.8 |
| hypothetical protein | PviCFBP13507_15230 | Not Available | Positive | 3428025 - 3428489 | 17622.3 |
| putative adenosine monophosphate-protein transferase fic | PviCFBP13507_15235 | Not Available | Positive | 3428494 - 3429081 | 22642.9 |
| sam-dependent methyltransferase | PviCFBP13507_15240 | Not Available | Negative | 3429126 - 3430313 | 44462.9 |
| cadmium-translocating p-type atpase | PviCFBP13507_15245 | Not Available | Negative | 3430607 - 3432532 | 66846.9 |
| hypothetical protein | PviCFBP13507_15250 | Not Available | Negative | 3432529 - 3433599 | 38341.6 |
| protease modulator hflc | PviCFBP13507_15255 | Not Available | Negative | 3433596 - 3434624 | 37353.1 |
| hypothetical protein | PviCFBP13507_15260 | Not Available | Negative | 3434636 - 3436591 | 70204.7 |
| cdp-alcohol phosphatidyltransferase family protein | PviCFBP13507_15265 | Not Available | Positive | 3436884 - 3437501 | 22190.8 |
| hypothetical protein | PviCFBP13507_15270 | Not Available | Positive | 3437535 - 3439292 | 65440.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
