Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | PviCFBP13507_15175 | Not Available | Positive | 3418346 - 3418831 | 18199.7 |
| pyridoxal kinase pdxy | PviCFBP13507_15180 | Not Available | Negative | 3418879 - 3419745 | 31025.7 |
| duf3301 domain-containing protein | PviCFBP13507_15185 | Not Available | Positive | 3419860 - 3420252 | 15021.2 |
| cobalamin biosynthesis protein cobw | PviCFBP13507_15190 | Not Available | Negative | 3420588 - 3421571 | 35545.0 |
| nadh:ubiquinone oxidoreductase | PviCFBP13507_15195 | Not Available | Positive | 3421624 - 3421995 | 13580.2 |
| duf1826 domain-containing protein | PviCFBP13507_15200 | Not Available | Negative | 3422002 - 3422652 | 23756.6 |
| 4-hydroxytetrahydrobiopterin dehydratase | PviCFBP13507_15205 | Not Available | Negative | 3422652 - 3423860 | 45334.5 |
| glutamine synthetase | PviCFBP13507_15210 | Not Available | Positive | 3424003 - 3424392 | 13893.5 |
| n-acetylmuramoyl-l-alanine amidase | PviCFBP13507_15215 | Not Available | Negative | 3424399 - 3425625 | 44329.6 |
| duf3617 domain-containing protein | PviCFBP13507_15220 | Not Available | Negative | 3425824 - 3426345 | 18972.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
