Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repressor protein | PviCFBP13507_24190 | Not Available | Positive | 5329589 - 5330233 | 23926.9 |
| Hypothetical protein | PviCFBP13507_24195 | Not Available | Positive | 5330382 - 5330639 | 9646.17 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 49 - 2963 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 63 - 1600 | Not Available |
| branched-chain amino acid abc transporter permease | PviCFBP13507_00010 | Not Available | Positive | 932 - 1633 | 24833.9 |
| branched-chain amino acid abc transporter | PviCFBP13507_00015 | Not Available | Positive | 1630 - 1947 | 11837.1 |
| mbl fold metallo-hydrolase | PviCFBP13507_00020 | Not Available | Negative | 2011 - 2886 | 31493.1 |
| lysr family transcriptional regulator | PviCFBP13507_00025 | Not Available | Positive | 2997 - 3896 | 32211.2 |
| hypothetical protein | PviCFBP13507_00030 | Not Available | Negative | 3933 - 4166 | 8270.15 |
| methyl-accepting chemotaxis protein | PviCFBP13507_00035 | Not Available | Negative | 4343 - 6283 | 69968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
