Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_15125 | Not Available | Positive | 3406670 - 3407620 | 35763.5 |
| hypothetical protein | PviCFBP13507_15130 | Not Available | Negative | 3407574 - 3407795 | 8617.93 |
| hypothetical protein | PviCFBP13507_15135 | Not Available | Positive | 3408016 - 3408327 | 11121.1 |
| transcriptional regulator hexr | PviCFBP13507_15140 | Not Available | Negative | 3408426 - 3409292 | 31041.7 |
| ggdef domain-containing protein | PviCFBP13507_15145 | Not Available | Negative | 3409476 - 3411968 | 92859.2 |
| hypothetical protein | PviCFBP13507_15150 | Not Available | Positive | 3412046 - 3412267 | 8130.88 |
| dna helicase ii | PviCFBP13507_15155 | Not Available | Positive | 3412257 - 3414440 | 81564.5 |
| hypothetical protein | PviCFBP13507_15160 | Not Available | Positive | 3414855 - 3415697 | 30180.8 |
| smi1/knr4 family protein | PviCFBP13507_15165 | Not Available | Positive | 3415829 - 3416236 | 15553.0 |
| cation:proton antiporter | PviCFBP13507_15170 | Not Available | Negative | 3416277 - 3418043 | 63893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
