Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PviCFBP13507_15020 | Not Available | Negative | 3384768 - 3386057 | 46019.9 |
| acyl-coa thioesterase | PviCFBP13507_15025 | Not Available | Positive | 3386486 - 3386887 | 14522.5 |
| d-hexose-6-phosphate mutarotase | PviCFBP13507_15030 | Not Available | Positive | 3386997 - 3387908 | 33900.0 |
| duf3299 domain-containing protein | PviCFBP13507_15035 | Not Available | Negative | 3387921 - 3388454 | 19327.7 |
| glsb/yeaq/ymge family stress response membrane protein | PviCFBP13507_15040 | Not Available | Negative | 3388538 - 3388783 | 8283.68 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | PviCFBP13507_15045 | Not Available | Negative | 3389120 - 3390202 | 38774.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | PviCFBP13507_15050 | Not Available | Negative | 3390212 - 3390703 | 16881.6 |
| hypothetical protein | PviCFBP13507_15055 | Not Available | Positive | 3391067 - 3391702 | 24280.1 |
| lysr family transcriptional regulator | PviCFBP13507_15060 | Not Available | Negative | 3391743 - 3392648 | 33034.1 |
| aspartate ammonia-lyase | PviCFBP13507_15065 | Not Available | Positive | 3392934 - 3394358 | 51200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
