Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | PviCFBP13507_14970 | Not Available | Positive | 3366469 - 3367791 | 49896.7 |
| hlyc/corc family transporter | PviCFBP13507_14975 | Not Available | Positive | 3367891 - 3369231 | 50131.3 |
| duf4124 domain-containing protein | PviCFBP13507_14980 | Not Available | Negative | 3369928 - 3370830 | 32476.0 |
| hypothetical protein | PviCFBP13507_14985 | Not Available | Negative | 3370969 - 3376197 | 191288.0 |
| two-component system response regulator | PviCFBP13507_14990 | Not Available | Negative | 3376666 - 3377562 | 32267.9 |
| phosphate transport system regulatory protein phou | PviCFBP13507_14995 | Not Available | Negative | 3377767 - 3378531 | 28954.6 |
| phosphate abc transporter atp-binding protein | PviCFBP13507_15000 | Not Available | Negative | 3378602 - 3379435 | 31188.7 |
| phosphate abc transporter permease ptsa | PviCFBP13507_15005 | Not Available | Negative | 3379506 - 3381176 | 60786.4 |
| phosphate abc transporter permease | PviCFBP13507_15010 | Not Available | Negative | 3381192 - 3383453 | 82686.1 |
| phosphate-binding protein | PviCFBP13507_15015 | Not Available | Negative | 3383616 - 3384614 | 34950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
