Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_14870 | Not Available | Positive | 3350644 - 3351552 | 34254.1 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | PviCFBP13507_14875 | Not Available | Positive | 3351979 - 3353100 | 39082.3 |
| nad(p) transhydrogenase subunit alpha | PviCFBP13507_14880 | Not Available | Positive | 3353111 - 3353434 | 11452.6 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | PviCFBP13507_14885 | Not Available | Positive | 3353431 - 3354885 | 50525.7 |
| propionyl-coa--succinate coa transferase | PviCFBP13507_14890 | Not Available | Positive | 3355066 - 3356559 | 54158.1 |
| duf1127 domain-containing protein | PviCFBP13507_14895 | Not Available | Positive | 3356880 - 3357095 | 8243.88 |
| duf2388 domain-containing protein | PviCFBP13507_14900 | Not Available | Positive | 3357415 - 3357735 | 10804.7 |
| duf2388 domain-containing protein | PviCFBP13507_14905 | Not Available | Positive | 3357828 - 3358133 | 10762.7 |
| duf2388 domain-containing protein | PviCFBP13507_14910 | Not Available | Positive | 3358172 - 3358492 | 11261.3 |
| duf4105 domain-containing protein | PviCFBP13507_14915 | Not Available | Positive | 3358489 - 3360450 | 73242.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
