Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | PviCFBP13507_14765 | Not Available | Positive | 3328031 - 3329194 | 40337.6 |
| hypothetical protein | PviCFBP13507_14770 | Not Available | Positive | 3329223 - 3329456 | 8412.09 |
| hypothetical protein | PviCFBP13507_14775 | Not Available | Positive | 3329543 - 3329734 | 6438.53 |
| hypothetical protein | PviCFBP13507_14780 | Not Available | Positive | 3329789 - 3330115 | 11846.0 |
| fructose-bisphosphate aldolase class ii | PviCFBP13507_14785 | Not Available | Positive | 3330230 - 3331294 | 38632.3 |
| duf3010 domain-containing protein | PviCFBP13507_14790 | Not Available | Negative | 3331736 - 3332155 | 14964.0 |
| duf1311 domain-containing protein | PviCFBP13507_14795 | Not Available | Negative | 3332210 - 3332620 | 15004.4 |
| membrane dipeptidase | PviCFBP13507_14800 | Not Available | Positive | 3332848 - 3333825 | 36008.2 |
| hydrocarbon binding protein | PviCFBP13507_14805 | Not Available | Positive | 3333909 - 3334439 | 19659.4 |
| dimethylglycine demethylation protein dgca | PviCFBP13507_14810 | Not Available | Positive | 3334455 - 3336515 | 75529.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
