Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | PviCFBP13507_14715 | Not Available | Positive | 3317210 - 3318601 | 51414.4 |
| hypothetical protein | PviCFBP13507_14720 | Not Available | Positive | 3318698 - 3319099 | 14097.7 |
| duf1090 domain-containing protein | PviCFBP13507_14725 | Not Available | Negative | 3319297 - 3319704 | 14960.8 |
| nad-dependent dna ligase ligb | PviCFBP13507_14730 | Not Available | Negative | 3319759 - 3321441 | 61701.6 |
| pbsx family transcriptional regulator | PviCFBP13507_14735 | Not Available | Positive | 3321685 - 3321939 | 9219.3 |
| toxin chpb | PviCFBP13507_14740 | Not Available | Positive | 3321936 - 3322283 | 12252.7 |
| methionine adenosyltransferase | PviCFBP13507_14745 | Not Available | Negative | 3322369 - 3323559 | 42585.6 |
| methyltransferase domain-containing protein | PviCFBP13507_14750 | Not Available | Negative | 3323580 - 3324575 | 36189.5 |
| transketolase | PviCFBP13507_14755 | Not Available | Positive | 3324834 - 3326831 | 72373.6 |
| erythrose-4-phosphate dehydrogenase | PviCFBP13507_14760 | Not Available | Positive | 3326965 - 3328014 | 38599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
