Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | PviCFBP13507_14665 | Not Available | Negative | 3304775 - 3305740 | 35620.1 |
| inositol phosphorylceramide synthase | PviCFBP13507_14670 | Not Available | Negative | 3305727 - 3306359 | 23535.1 |
| hypothetical protein | PviCFBP13507_14675 | Not Available | Negative | 3306356 - 3307450 | 40143.1 |
| hypothetical protein | PviCFBP13507_14680 | Not Available | Negative | 3307447 - 3308190 | 27844.9 |
| hypothetical protein | PviCFBP13507_14685 | Not Available | Negative | 3308187 - 3309179 | 35445.3 |
| glycosyltransferase family 2 protein | PviCFBP13507_14690 | Not Available | Negative | 3309233 - 3310321 | 39363.1 |
| cusa/czca family heavy metal efflux rnd transporter | PviCFBP13507_14695 | Not Available | Negative | 3310544 - 3313711 | 114007.0 |
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13507_14700 | Not Available | Negative | 3313736 - 3315013 | 45137.9 |
| tolc family protein | PviCFBP13507_14705 | Not Available | Negative | 3315071 - 3316294 | 44424.7 |
| dna-binding response regulator | PviCFBP13507_14710 | Not Available | Positive | 3316539 - 3317213 | 25810.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
