Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kr domain-containing protein | PviCFBP13507_01300 | Not Available | Positive | 295276 - 296142 | 31115.2 |
| nad-dependent succinate-semialdehyde dehydrogenase | PviCFBP13507_01305 | Not Available | Positive | 296387 - 297817 | 50637.8 |
| d-alanyl-d-alanine endopeptidase | PviCFBP13507_01310 | Not Available | Negative | 297886 - 298827 | 34326.0 |
| hypothetical protein | PviCFBP13507_01315 | Not Available | Positive | 299079 - 299639 | 21246.0 |
| hypothetical protein | PviCFBP13507_01320 | Not Available | Negative | 299840 - 300022 | 6437.83 |
| hypothetical protein | PviCFBP13507_01325 | Not Available | Negative | 300195 - 300563 | 13458.0 |
| shikimate 5-dehydrogenase | PviCFBP13507_01330 | Not Available | Positive | 300788 - 301600 | 28819.5 |
| duf480 domain-containing protein | PviCFBP13507_01335 | Not Available | Negative | 301972 - 302640 | 24691.6 |
| duf1993 domain-containing protein | PviCFBP13507_01340 | Not Available | Positive | 302785 - 303294 | 18826.7 |
| mfs transporter | PviCFBP13507_01345 | Not Available | Positive | 303449 - 304600 | 39918.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
