Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_14455 | Not Available | Negative | 3265392 - 3265937 | 20118.4 |
| acyl carrier protein | PviCFBP13507_14460 | Not Available | Negative | 3265934 - 3266188 | 9681.54 |
| acyl carrier protein | PviCFBP13507_14465 | Not Available | Negative | 3266198 - 3266458 | 9305.08 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PviCFBP13507_14470 | Not Available | Negative | 3266433 - 3267245 | 30044.7 |
| 3-oxoacyl-acp synthase | PviCFBP13507_14475 | Not Available | Negative | 3267221 - 3267940 | 26897.8 |
| para family protein | PviCFBP13507_14480 | Not Available | Positive | 3268291 - 3269070 | 29061.8 |
| malonate decarboxylase subunit alpha | PviCFBP13507_14490 | Not Available | Positive | 3269664 - 3271340 | 61399.9 |
| triphosphoribosyl-dephospho-coa synthase mdcb | PviCFBP13507_14495 | Not Available | Positive | 3271340 - 3272227 | 30719.8 |
| malonate decarboxylase subunit delta | PviCFBP13507_14500 | Not Available | Positive | 3272229 - 3272528 | 10733.9 |
| biotin-independent malonate decarboxylase subunit beta | PviCFBP13507_14505 | Not Available | Positive | 3272521 - 3273372 | 29949.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
