Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_14405 | Not Available | Negative | 3254609 - 3255091 | 18394.4 |
| sam-dependent methyltransferase | PviCFBP13507_14410 | Not Available | Negative | 3255088 - 3255822 | 27723.2 |
| fad-dependent oxidoreductase | PviCFBP13507_14415 | Not Available | Negative | 3255819 - 3257066 | 46051.5 |
| hypothetical protein | PviCFBP13507_14420 | Not Available | Negative | 3257148 - 3259490 | 84091.4 |
| outer membrane lipoprotein carrier protein lola | PviCFBP13507_14425 | Not Available | Negative | 3259474 - 3260088 | 22520.2 |
| acyl-coa thioesterase | PviCFBP13507_14430 | Not Available | Negative | 3260085 - 3260510 | 16243.7 |
| histidine ammonia-lyase | PviCFBP13507_14435 | Not Available | Negative | 3260500 - 3262047 | 56131.4 |
| glycosyl transferase | PviCFBP13507_14440 | Not Available | Negative | 3262028 - 3262975 | 36346.0 |
| glycosyltransferase family 2 protein | PviCFBP13507_14445 | Not Available | Negative | 3262972 - 3263706 | 27872.1 |
| amp-binding protein | PviCFBP13507_14450 | Not Available | Negative | 3263699 - 3265390 | 62529.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
