Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | PviCFBP13507_14355 | Not Available | Negative | 3244041 - 3245216 | 41049.6 |
| hypothetical protein | PviCFBP13507_14360 | Not Available | Negative | 3245244 - 3245861 | 22324.4 |
| histidine utilization repressor | PviCFBP13507_14365 | Not Available | Negative | 3245858 - 3246607 | 27710.3 |
| formimidoylglutamate deiminase | PviCFBP13507_14370 | Not Available | Positive | 3246748 - 3248112 | 49862.3 |
| mfs transporter | PviCFBP13507_14375 | Not Available | Negative | 3248428 - 3249696 | 45011.1 |
| lysr family transcriptional regulator | PviCFBP13507_14380 | Not Available | Positive | 3249814 - 3250698 | 32250.1 |
| beta-ketoacyl-acp synthase | PviCFBP13507_14385 | Not Available | Negative | 3251013 - 3252239 | 43871.1 |
| 3-oxoacyl-acp reductase fabg | PviCFBP13507_14390 | Not Available | Negative | 3252239 - 3252967 | 25888.5 |
| 3-hydroxylacyl-acp dehydratase | PviCFBP13507_14395 | Not Available | Negative | 3252964 - 3253419 | 16131.3 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | PviCFBP13507_14400 | Not Available | Negative | 3253416 - 3254612 | 41624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
