Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | PviCFBP13507_14255 | Not Available | Negative | 3221216 - 3222421 | 43166.7 |
| amino acid permease | PviCFBP13507_14260 | Not Available | Negative | 3222438 - 3223814 | 49192.7 |
| histidine ammonia-lyase | PviCFBP13507_14265 | Not Available | Negative | 3223918 - 3225465 | 54662.7 |
| histidine ammonia-lyase | PviCFBP13507_14270 | Not Available | Negative | 3225560 - 3227101 | 54710.0 |
| abc transporter atp-binding protein | PviCFBP13507_14275 | Not Available | Negative | 3227114 - 3227944 | 30870.7 |
| proline/glycine betaine abc transporter permease | PviCFBP13507_14280 | Not Available | Negative | 3227941 - 3228792 | 30788.0 |
| histidine abc transporter substrate-binding protein | PviCFBP13507_14285 | Not Available | Negative | 3228871 - 3229839 | 35250.4 |
| urocanate hydratase | PviCFBP13507_14290 | Not Available | Negative | 3229952 - 3231646 | 61768.3 |
| hypothetical protein | PviCFBP13507_14295 | Not Available | Positive | 3232037 - 3232873 | 31256.9 |
| eama/rhat family transporter | PviCFBP13507_14300 | Not Available | Positive | 3232979 - 3233887 | 32584.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
