Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_14195 | Not Available | Negative | 3209224 - 3209865 | 23683.4 |
| Trna-arg | Not Available | Not Available | Positive | 3211177 - 3211253 | Not Available |
| nadp-dependent succinate-semialdehyde dehydrogenase i | PviCFBP13507_14205 | Not Available | Positive | 3211596 - 3213038 | 51580.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | PviCFBP13507_14210 | Not Available | Positive | 3213228 - 3214508 | 44911.7 |
| histidine kinase | PviCFBP13507_14220 | Not Available | Positive | 3214669 - 3216057 | 49898.7 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | PviCFBP13507_14225 | Not Available | Positive | 3216385 - 3216942 | 20557.4 |
| hypothetical protein | PviCFBP13507_14230 | Not Available | Negative | 3216986 - 3217279 | 10854.0 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | PviCFBP13507_14235 | Not Available | Negative | 3217286 - 3217732 | 16648.6 |
| heavy metal translocating p-type atpase | PviCFBP13507_14240 | Not Available | Positive | 3217818 - 3220055 | 78705.4 |
| n-formylglutamate deformylase | PviCFBP13507_14250 | Not Available | Negative | 3220401 - 3221204 | 30010.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
