Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | PviCFBP13507_01250 | Not Available | Negative | 286178 - 287287 | 40488.4 |
| duf1330 domain-containing protein | PviCFBP13507_01255 | Not Available | Positive | 287380 - 287670 | 10724.7 |
| gnat family n-acetyltransferase | PviCFBP13507_01260 | Not Available | Positive | 287747 - 288250 | 18755.9 |
| nudix domain-containing protein | PviCFBP13507_01265 | Not Available | Negative | 288903 - 289466 | 21199.3 |
| gntr family transcriptional regulator | PviCFBP13507_01270 | Not Available | Negative | 289468 - 290220 | 28042.0 |
| flavin reductase | PviCFBP13507_01275 | Not Available | Negative | 290395 - 290880 | 17227.9 |
| aldehyde dehydrogenase | PviCFBP13507_01280 | Not Available | Negative | 290894 - 292375 | 53203.7 |
| alpha/beta hydrolase | PviCFBP13507_01285 | Not Available | Negative | 292372 - 293205 | 29892.8 |
| amino acid synthesis family protein | PviCFBP13507_01290 | Not Available | Negative | 293240 - 293830 | 21474.8 |
| aldehyde dehydrogenase | PviCFBP13507_01295 | Not Available | Positive | 294069 - 295208 | 40611.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
