Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | PviCFBP13507_14095 | Not Available | Negative | 3188236 - 3188637 | 14454.6 |
| mota/tolq/exbb proton channel family protein | PviCFBP13507_14100 | Not Available | Negative | 3188637 - 3189344 | 25255.5 |
| energy transducer tonb | PviCFBP13507_14105 | Not Available | Negative | 3189395 - 3190225 | 29222.4 |
| hypothetical protein | PviCFBP13507_14110 | Not Available | Positive | 3191389 - 3191643 | 9090.08 |
| iscs subfamily cysteine desulfurase | PviCFBP13507_14115 | Not Available | Negative | 3191709 - 3192863 | 40483.3 |
| lrp/asnc family transcriptional regulator | PviCFBP13507_14120 | Not Available | Positive | 3193197 - 3193667 | 17328.8 |
| had family hydrolase | PviCFBP13507_14125 | Not Available | Positive | 3193937 - 3194611 | 24658.5 |
| hypothetical protein | PviCFBP13507_14130 | Not Available | Positive | 3194774 - 3195067 | 10990.8 |
| pyridoxal-5'-phosphate-dependent protein | PviCFBP13507_14135 | Not Available | Negative | 3195235 - 3196128 | 32484.1 |
| mfs transporter | PviCFBP13507_14140 | Not Available | Negative | 3196125 - 3197336 | 42408.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
