Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_13990 | Not Available | Positive | 3163859 - 3164044 | 7029.9 |
| glutamine synthetase | PviCFBP13507_13995 | Not Available | Positive | 3164384 - 3165742 | 51135.1 |
| aspartate aminotransferase family protein | PviCFBP13507_14000 | Not Available | Positive | 3165811 - 3167184 | 50463.7 |
| polyamine abc transporter substrate-binding protein | PviCFBP13507_14005 | Not Available | Positive | 3167479 - 3168576 | 39674.7 |
| polyamine abc transporter substrate-binding protein | PviCFBP13507_14010 | Not Available | Positive | 3168748 - 3169842 | 39749.4 |
| polyamine abc transporter atp-binding protein | PviCFBP13507_14015 | Not Available | Positive | 3169899 - 3171041 | 42445.4 |
| putrescine abc transporter permease poth | PviCFBP13507_14020 | Not Available | Positive | 3171038 - 3171958 | 34327.3 |
| putrescine abc transporter permease poti | PviCFBP13507_14025 | Not Available | Positive | 3171955 - 3172836 | 31990.9 |
| penicillin acylase family protein | PviCFBP13507_14035 | Not Available | Negative | 3173135 - 3175522 | 88627.5 |
| alpha/beta hydrolase | PviCFBP13507_14040 | Not Available | Positive | 3175726 - 3176667 | 34795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
