Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated protein flil | PviCFBP13507_13730 | Not Available | Positive | 3110930 - 3111334 | 14788.9 |
| eve domain-containing protein | PviCFBP13507_13735 | Not Available | Negative | 3111341 - 3111790 | 16768.9 |
| hypothetical protein | PviCFBP13507_13740 | Not Available | Positive | 3111974 - 3112126 | 5724.08 |
| 5-formyltetrahydrofolate cyclo-ligase | PviCFBP13507_13745 | Not Available | Negative | 3112193 - 3112804 | 23736.1 |
| cell division protein zapa | PviCFBP13507_13755 | Not Available | Negative | 3113117 - 3113446 | 11893.1 |
| tigr02449 family protein | PviCFBP13507_13760 | Not Available | Negative | 3113443 - 3113652 | 8141.86 |
| hypothetical protein | PviCFBP13507_13765 | Not Available | Positive | 3113802 - 3114356 | 19701.3 |
| xaa-pro aminopeptidase | PviCFBP13507_13770 | Not Available | Positive | 3114428 - 3115762 | 49197.8 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | PviCFBP13507_13775 | Not Available | Positive | 3115759 - 3116946 | 43097.4 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | PviCFBP13507_13780 | Not Available | Positive | 3116996 - 3118216 | 44361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
